Recent Scientific Publications

As of July 22, 2024

Comstock, J., Henderson, L. C., Close, H. G., Liu, S., Vergin, K.,Worden, A. Z.,Wittmers, F., Halewood, E., Giovannoni, S., & Carlson, C. A. (2024). Marine particle size-fractionation indicates organic matter is processed by differing microbial communities on depth-specific particles.ISME Communications, ycae090.

Lippmann, K.(2024). A Reduction in the Readily Releasable Vesicle Pool Impairs GABAergic Inhibition in the Hippocampus after Blood–Brain Barrier Dysfunction.International Journal of Molecular Sciences,25(13).

Nowell, R. W.,Rodriguez, F.,Hecox-Lea, B. J.,Mark Welch, D. B.,Arkhipova, I. R., Barraclough, T. G., & Wilson, C. G. (2024). Bdelloid rotifers deploy horizontally acquired biosynthetic genes against a fungal pathogen.Nature Communications,15, 5787.

Schaible, G. A., Jay, Z. J., Cliff, J., Schulz, F., Gauvin, C., Goudeau, D., Malmstrom, R. R.,Ruff, S. E., Edgcomb, V., & Hatzenpichler, R. (2024). Multicellular magnetotactic bacteria are genetically heterogeneous consortia with metabolically differentiated cells.PLOS Biology,22(7), e3002638.

Vargas-Muñiz, J. M.(2024). Adaptive fungal invasion of bat cells.Science,385(6705), 142–143.

Berry, N. E., Cassford, M. S., Agostino, C. J., Dionne, E. N., Schmitt, O. J., Butela, K. A., Jacobs-Sera, D.,DeGiorgis, J. A., & Cornely, K. (2024). Genomic sequences ofMycobacterium smegmatisA cluster phages LBerry, Pembroke, and Zolita.Microbiology Resource Announcements, e00504-24.

Stekoll, M., Pryor, A., Meyer, A., Kite-Powell, H. L., Bailey, D., Barbery, K., Goudey, C. A., Lindell, S.,Roberson, L., & Yarish, C.(2024). Optimizing seaweed biomass production—A two kelp solution.Journal of Applied Phycology.

Treidel, L. A., Deem, K. D., Salcedo, M. K., Dickinson, M. H.,Bruce, H. S., Darveau, C.-A., Dickerson, B. H., Ellers, O., Glass, J. R., Gordon, C. M., Harrison, J. F., Hedrick, T. L., Johnson, M. G., Lebenzon, J. E., Marden, J. H., Niitepõld, K., Sane, S. P., Sponberg, S., Talal, S., Williams, C. M. & Wold, E. S. (2024). Insect Flight: State of the Field and Future Directions.Integrative and Comparative Biology, icae106.

Trouche, B., Schrieke, H., Duron, O.,Eren, A. M., & Reveillaud, J. (2024).´DZ󾱲populations across organs of individualCulex pipiens: Highly conserved intra-individual core pangenome with inter-individual polymorphisms.ISME Communications,4(1), ycae078.

Brock, M. T.,Morrison, H. G.,Maignien, L., & Weinig, C. (2024). Impacts of sample handling and storage conditions on archiving physiologically active soil microbial communities.FEMS Microbiology Letters, fnae044.

Hanlon, R. T.(2024).Octopus cyanea, day octopus. In R. Rosa, I. G. Gleadall, G. J. Pierce, & R. Villanueva (Eds.),Octopus Biology and Ecology(pp. 61–74). Academic Press.

Casiano Rivera, C. V.,Wallace, J. N.,Fisher, G. E., &Morgan, J. R.(2024). Acute introduction of phosphoserine-129 α-synuclein induces severe swelling of mitochondria at lamprey synapses.microPublication Biology.

Frangieh, C. J., Wilkinson, M. E., Strebinger, D., Strecker, J., Walsh, M. L., Faure, G.,Yushenova, I. A., Macrae, R. K.,Arkhipova, I. R., & Zhang, F. (2024). Internal initiation of reverse transcription in a Penelope-like retrotransposon.Mobile DNA,15, 12.

Pelagalli, C., Sera, D.-J.,DeGiorgis, J. A., & Cornely, K. (2024). Mycobacteriophage maravista: A cluster F1 phage discovered on Cape Cod, Massachusetts.Microbiology Resource Announcements, e00502-24.

Rosa, R., Santos, C. P., Borges, F., Amodio, P., Amor, M., Bower, J. R., Caldwell, R. L., Di Cosmo, A., Court, M., Fiorito, G., Gestal, C., González, Á. F., Guerra, Á.,Hanlon, R. T., Hofmeister, J. K. K., Ibáñez, C. M., Ikeda, Y., Imperadore, P., Kommritz, J. G., Kuba, M., Hall, K. C., Lajbner, Z., Leite, T. S., Lopes, V. M., Markaida, U., Moltschaniwskyj, N. A., Nabhitabhata, J., Ortiz, N., Otjacques, E., Pizzulli, F., Ponte, G., Polese, G., Raffini, F., Rosas, C., Roura, A., Sampaio, E., Segawa, S., Simakov, O., Sobrino, I., Storero, L. P., Voight, J. R., Williams, B. L., Zheng, X., Pierce, G. J., Villanueva, R., & Gleadall, I. G. (2024). Chapter 23—Past, present, and future trends in octopus research. In R. Rosa, I. G. Gleadall, G. J. Pierce, & R. Villanueva (Eds.),Octopus Biology and Ecology(pp. 421–454). Academic Press.

Zhou, Y., O’Meara, T.,Cardon, Z. G., Wang, J., Sulman, B. N.,Giblin, A. E., &Forbrich, I.(2024). Simulated plant-mediated oxygen input has strong impacts on fine-scale porewater biogeochemistry and weak impacts on integrated methane fluxes in coastal wetlands.Biogeochemistry.

Eckmann, C. A., Bachy, C.,Wittmers, F., Strauss, J., Blanco-Bercial, L., Vergin, K. L., Parsons, R. J., Kudela, R. M., Johnson, R., Bolaños, L. M., Giovannoni, S. J., Carlson, C. A., &Worden, A. Z.(2024). Recurring seasonality exposes dominant species and niche partitioning strategies of open ocean picoeukaryotic algae.Communications Earth & Environment,5, 266.

Haviland, K.,Howarth, R.,Hayn, M., &Giblin, A.(2024). Characterizing Spatial and Temporal Trends in Net Sediment Accumulation in Seagrass Meadows.Estuaries and Coasts.

Metzger, B., &Özpolat, B. D.(2024). Developmental stage dependent effects of posterior and germline regeneration on sexual maturation inPlatynereis dumerilii.Developmental Biology.

Perillo, M., Alessandro, T., Toscano, A., & Annunziata, R. (2024). Larval development ofHolothuria tubulosa, a new tractable system for evo-devo.Frontiers in Ecology and Evolution,12.

Whittaker, B., Zeigler, E., Garcia-Mata, R.,Wallace, J. N.,Morgan, J. R., Rodal, A. A., & Welch, M. D. (2024). From pipette to palette: Bridging science and art atMBoC.Molecular Biology of the Cell,35(6), ed2.

De Niz, M., Escobedo García, R., Terán Ramirez, C., Pakowski, Y., Abonza, Y., Bialy, N., Orr, V. L., Olivera, A., Abonza, V., Alleva, K., Allodi, S., Almeida, M. F., Becerril Cuevas, A. R., Bonnet, F., Burgos Solorio, A., Chew, T.-L., Chiabrando, G., Cimini, B., Cleret-Buhot, A., Jimenez, G. C., Daza, L., De Sa, V., De Val, N., Delgado-Alvarez, D. L., Eliceiri, K., Fiolka, R., Grecco, H., Hanein, D., Herrera, P. H., Hockberger, P., Hernandez, H. O., Guadarrama, Y. H., Itano, M., Jacobs, C. A., Jimenez-Garcia, L. F., Jimenez Sabinina, V., Kamaid, A., Keppler, A.,Kumar, A., Lacoste, J., Lovy, A., Luby-Phelps, K., Mahadevan-Jansen, A., Malacrida, L., Mehta, S. B., Miller, C., Miranda, K., Moore, J. A., North, A., O’Toole, P., Olivares Ubano, M., Pietrasanta, L. I., Portugal, R. V., Rossi, A. H., Sanchez Contreras, J., Strambio-De-Castilla, C., Soldevila, G., Vale, B., Vazquez, D., Wood, C., Brown, C. M., & Guerrero, A. (2024). Building momentum through networks: Bioimaging across the Americas.Journal of Microscopy,294(3), 420–439.

Liguori, A.,Korm, S.,Profetto, A.,Richters, E., &Gribble, K. E.(2024). Maternal age effects on offspring lifespan and reproduction vary within a species.Ecology and Evolution,14(5), e11287.

Sutherland, K. R., Damian-Serrano, A., Du Clos, K. T., Gemmell, B. J.,Colin, S. P., &Costello, J. H.(2024). Spinning and corkscrewing of oceanic macroplankton revealed through in situ imaging.Science Advances,10(20), eadm9511.

Wilson, S., Moody, A., McKenzie, T., Cardenas, M., Luijendijk, E., Sawyer, A., Wilson, A., Michael, H., Xu, B., Knee, K., Cho, H., Weinstein, Y., Paytan, A., Moosdorf, N., Chen, C., Beck, M., Lopez, C., Murgulet, D., Kim, G., Charette, M. A., Waska, H., Ibanhez, J. S. P., Chaillou, G., Oehler, T., Onodera, S., Saito, M., Rodellas, V., Dimova, N., Montiel, D., Dulai, H., Richardson, C., Du, J., Petermann, E., Chen, X., Davis, K. L., Lamontagne, S., Sugimoto, R., Wang, G., Li, H., Torres, A. I., Demir, C., Bristol, E., Connolly, C. T.,McClelland, J. W., Silva, B. J., Tait, D., Kumar, BSK, Viswanadham, R., Sarma, VVSS, Silva-Filho, E., Shiller, A., Lecher, A., Tamborski, J., Bokuniewicz, H., Rocha, C., Reckhart, A., Bottcher, M. E., Jiang, S., Stieglitz, T., Gbewezoun, H. G. V., Charbonnier, C., Anschutz, P., Hernandez-Terrones, L. M., Babu, S., Szymczycha, B., Sadat-Noori, M., Niencheski, F., Null, K., Tobias, C., Song, B., Anderson, I. C., & Santos, I. (2024). Global subterranean estuaries modify groundwater nutrient loading to the ocean.Limnology and Oceanography Letters.

Bullock, E. J., Schaal, I. V., Cardenas, M. B.,McClelland, J. W., Henderson, P. B., & Charette, M. A. (2024). Seasonality of submarine groundwater discharge to an Arctic coastal lagoon.Limnology and Oceanography.

Sulman, B. N., Wang, J., LaFond-Hudson, S., O’Meara, T. A., Yuan, F., Molins, S., Hammond, G.,Forbrich, I.,Cardon, Z. G., &Giblin, A.(2024). Integrating Tide-Driven Wetland Soil Redox and Biogeochemical Interactions Into a Land Surface Model.Journal of Advances in Modeling Earth Systems,16(4), e2023MS004002.

Arkhipova, I., &Yushenova, I.(2023). To be mobile or not: The variety of reverse transcriptases and their recruitment by host genomes.Биохимия,88(11), 2127–2137.

Maes, S. L., Dietrich, J., Midolo, G., Schwieger, S., Kummu, M., Vandvik, V., Aerts, R., Althuizen, I. H. J., Biasi, C., Björk, R. G., Böhner, H., Carbognani, M., Chiari, G., Christiansen, C. T., Clemmensen, K. E., Cooper, E. J., Cornelissen, J. H. C., Elberling, B., Faubert, P., Fetcher, N., Forte, T. G. W., Gaudard, J., Gavazov, K., Guan, Z., Guomundsson, J., Gya, R., Hallin, S., Hansen, B. B., Haugum, S. V., He, J.-S., Hicks Pries, C., Hovenden, M. J., Jalava, M., Jonsdottir, I. S., Juhanson, J., Jung, J. Y., Kaarlejarvi, E., Kwon, M. J., Lamprecht, R. E., Le Moullec, M., Lee, H., Marushchak, M. E., Michelsen, A., Munir, T. M., Myrsky, E. M., Nielsen, C. S., Nyberg, M., Olofsson, J., Oskarsson, H., Parker, T. C., Pedersen, E. P., Petit Bon, M., Petraglia, A., Raundrup, K., Ravn, N. M. R., Rinnan, R., Rodenhizer, H., Ryde, I., Schmidt, N. M., Schuur, E. A. G., Sjogersten, S., Stark, S., Strack, M.,Tang, J., Tolvanen, A., Topper, J. P., Vaisanen, M. K., van Logtestijn, R. S. P., Voigt, C., Walz, J., Weedon, J. T., Yang, Y., Ylanne, H., Bjorkman, M. P., Sarneel, J. M., & Dorrepaal, E. (2024). Environmental drivers of increased ecosystem respiration in a warming tundra.Nature.

Álvarez-Campos, P., García-Castro, H., Emili, E., Pérez-Posada, A., del Olmo, I., Peron, S., Salamanca-Díaz, D. A., Mason, V.,Metzger, B., Bely, A. E., Kenny, N. J.,Özpolat, B. D., & Solana, J. (2024). Annelid adult cell type diversity and their pluripotent cellular origins.Nature Communications,15, 3194.

Mantica, F., Iñiguez, L. P., Marquez, Y., Permanyer, J., Torres-Mendez, A., Cruz, J., Franch-Marro, X., Tulenko, F., Burguera, D., Bertrand, S., Doyle, T., Nouzova, M., Currie, P. D., Noriega, F. G., Escriva, H., Arnone, M. I.,Albertin, C. B., Wotton, K. R., Almudi, I., Martin, D., & Irimia, M. (2024). Evolution of tissue-specific expression of ancestral genes across vertebrates and insects.Nature Ecology & Evolution.

O’Shea, R., Capuzzo, E., Hemming, V.,Grebe, G., Stafford, R., van den Burg, S. W. K., Wood, D., Watson, G., Wells, V., Johnson, T., Erbs, S., W. van Hal, J., Binnerts, B., Collins, A. M., & Howe, C. (2024). Managing offshore multi-use settings: Use of conceptual mapping to reduce uncertainty of co-locating seaweed aquaculture and wind farms.Journal of Environmental Management,358, 120696.

Petrova, K., Tretiakov, M., Kotov, A., Monsoro-Burq, A. H., &Peshkin, L.(2024). A new atlas to study embryonic cell types in Xenopus.Developmental Biology.

Liu, X. J. A., Han, S., Frey, S. D.,Melillo, J. M., Zhou, J., & DeAngelis, K. M. (2024). Microbial responses to long-term warming differ across soil microenvironments.ISME Communications, ycae051.

Harbeitner, R. C.,Wittmers, F., Yung, C. C. M.,Eckmann, C. A., Hehenberger, E., Blum, M., Needham, D. M., &Worden, A. Z.(2024). Gradients of bacteria in the oceanic water column reveal finely-resolved vertical distributions.PLOS ONE,19(4), e0298139.

Roberson, L.,Grebe, G., Arzeno-Soltero, I., Bailey, D., Chan, S., Davis, K., Goudey, C., Kite-Powell, H., Lindell, S., Manganelli, D., Marty-Rivera, M., Ng, C., Rollano, F., Saenz, B., Van Cise, A., Waters, T., Yang, Z., & Yarish, C.(2024). Developing Cultivation Systems and Better Management Practices for Caribbean Tropical Seaweeds in US Waters. InTropical Phyconomy Coalition Development(Vol. 11, pp. 121–141). Springer Nature.

Wang, T., Du, B.,Forbrich, I., Zhou, J., Polen, J., Sunderland, E., Balcom, P., Chen, C., & Obrist, D. (2024). Above- and belowground plant mercury dynamics in a salt marsh estuary in Massachusetts, USA.Biogeosciences,21(6), 1461–1476.

Grone, J., Poirier, C., Abbott, K.,Wittmers, F., Jaeger, G. S., Mahadevan, A., &Worden, A. Z.(2024). A singleProchlorococcusecotype dominates the tropical Bay of Bengal with ultradian growth.Environmental Microbiology,26(3), e16605.

Gutiérrez-Ibáñez, C., & Wylie, D. R. (2024). Investigation of central pattern generators in the spinal cord of chicken embryos.Journal of Comparative Physiology A.

McAllister, C. T., &Remsen, D.(2024). A New State Record for the Milliped,Howellaria infesta(Diplopoda: Polydesmida: Xystodesmidae).Entomological News,131(2), 61–63.

Minařík, M., Modrell, M. S.,Gillis, J. A., Campbell, A. S., Fuller, I., Lyne, R., Micklem, G., Gela, D., Pšenička, M., & Baker, C. V. H. (2024). Identification of multiple transcription factor genes potentially involved in the development of electrosensoryversusmechanosensory lateral line organs.Frontiers in Cell and Developmental Biology,12.

Sackville, M. A.,Gillis, J. A., & Brauner, C. J. (2024). The origins of gas exchange and ion regulation in fish gills: Evidence from structure and function.Journal of Comparative Physiology B.

Deng, H., He, C.,Worden, A. Z., & Gong, J. (2024). Employing a triple metabarcoding approach to differentiate active, dormant and dead microeukaryotes in sediments.Environmental Microbiology,26(3), e16615.

Diaz Soria, C. L., Attenborough, T., Lu, Z., Fontenla, S., Graham, J., Hall, C., Thompson, S., Andrews, T. G. R.,Rawlinson, K. A., Berriman, M., & Rinaldi, G. (2024). Single-cell transcriptomics of the human parasiteSchistosoma mansonifirst intra-molluscan stage reveals tentative tegumental and stem-cell regulators.Scientific Reports,14, 5974.

Giacomini, J. J., Torres-Morales, J., Tang, J., Dewhirst, F. E., Borisy, G. G., &Mark Welch, J. L.(2024). Spatial ecology ofHaemophilus and Aggregatibacterin the human oral cavity.Microbiology Spectrum, e04017-23.

MacCord, K., &Maienschein, J.(2024). Studying Regeneration Through History as a Way of Looking Forward.Journal of the History of Biology.

Buresch, K. C., Huget, N. D., Brister, W. C., Zhou, E. Y., Lineaweaver, A. S., Rifai, C., Hu, J., Stevenson, Z. E., Boal, J. G., &Hanlon, R. T.(2024). Evidence for tactile 3D shape discrimination by octopus.Journal of Comparative Physiology A.

Jarriel, S., Formel, N.,Ferguson,S., Jensen, F., Apprill, A., & Mooney, T. (2024). Unidentified fish sounds as indicators of coral reef health and comparison to other acoustic methods.Frontiers in Remote Sensing,5, 1338586.

McNellis, R., van Gestel, N., Thomas, R. Q., & Smith, N. G. (2024). Winter cover cropping increases albedo and latent heat flux in a Texas High Plains agroecosystem.Ecosphere,15(2), e4753.

Fogarty, E. C., Schechter, M. S., Lolans, K., Sheahan, M. L., Veseli, I., Moore, R. M., Kiefl, E., Moody, T., Rice, P. A., Yu, M. K., Mimee, M., Chang, E. B., Ruscheweyh, H.-J., Sunagawa, S., Mclellan, S. L., Willis, A. D., Comstock, L. E., &Eren, A. M.(2024). A cryptic plasmid is among the most numerous genetic elements in the human gut.Cell,187(5), 1206-1222.e16.

McMaken, C. M., &Gribble, K. E.(2024). A free and user-friendly software protocol for the quantification of microfauna swimming behavior.BioTechniques.